Difference between revisions of "1.5.99.12-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6446 PWY-6446] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** trimethyllysine dioxygenase * ec-number: ** [http://enzyme...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6446 PWY-6446] ==
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== Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
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** benzoate biosynthesis iii (coa-dependent, non-β-oxidative)
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** trimethyllysine dioxygenase
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== Reaction(s) found ==
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* ec-number:
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* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
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** [http://enzyme.expasy.org/EC/1.14.11.8 ec-1.14.11.8]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2002 RXN-2002]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N6N6N6-TRIMETHYL-L-LYSINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11278 RXN-11278]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-33090}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=benzoate biosynthesis iii (coa-dependent, non-&beta;-oxidative)}}
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* Gene: [[SJ15054]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.33}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=3}}
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* Gene: [[SJ07386]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12451]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ04638]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ09343]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ04640]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ04639]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ18761]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ01929]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-6100]], L-carnitine biosynthesis:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14182 14182]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03451 R03451]
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{{#set: direction=left-to-right}}
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{{#set: common-name=trimethyllysine dioxygenase}}
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{{#set: ec-number=ec-1.14.11.8}}
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{{#set: nb gene associated=9}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:44, 18 December 2020

Reaction TRIMETHYLLYSINE-DIOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • trimethyllysine dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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