Difference between revisions of "1.6.4.4-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** left-to-right * common-name: ** quinoli...")
(Created page with "Category:reaction == Reaction 2-MEBUCOA-FAD-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.3.99.12 ec-1.3.99.12] * synonymous: ** branche...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
+
== Reaction 2-MEBUCOA-FAD-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** quinolinate phosphoribosyltransferase (decarboxylating)
 
−
** nicotinate-nucleotide diphosphorylase (carboxylating)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.19 ec-2.4.2.19]
+
** [http://enzyme.expasy.org/EC/1.3.99.12 ec-1.3.99.12]
 +
* synonymous:
 +
** branched-chain acyl-coa dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[Acceptor]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[Donor-H2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19144]]
+
* Gene: [[SJ21233]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04451]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11253]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12735 12735]
+
{{#set: ec-number=ec-1.3.99.12}}
−
* LIGAND-RXN:
+
{{#set: synonymous=branched-chain acyl-coa dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
+
{{#set: nb gene associated=1}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q57916 Q57916]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P30011 P30011]
 
−
** [http://www.uniprot.org/uniprot/P46714 P46714]
 
−
** [http://www.uniprot.org/uniprot/Q15274 Q15274]
 
−
** [http://www.uniprot.org/uniprot/P77938 P77938]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=quinolinate phosphoribosyltransferase (decarboxylating)|nicotinate-nucleotide diphosphorylase (carboxylating)}}
 
−
{{#set: ec-number=ec-2.4.2.19}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:42, 18 December 2020

Reaction 2-MEBUCOA-FAD-RXN

  • direction:
    • reversible
  • ec-number:
  • synonymous:
    • branched-chain acyl-coa dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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