Difference between revisions of "12-OXOPHYTODIENOATE-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] == * direction: ** left-to-right * common-name: ** acyl-coa synthetase ** long-c...")
(Created page with "Category:reaction == Reaction RXN-12177 == * direction: ** left-to-right * common-name: ** unsaturated chondroitin 6-sulfate disaccharide hydrolase * ec-number: ** [http:/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] ==
+
== Reaction RXN-12177 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acyl-coa synthetase
+
** unsaturated chondroitin 6-sulfate disaccharide hydrolase
−
** long-chain fatty acid-coa ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.2.1.180 ec-3.2.1.180]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[OLEATE-CPD]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[4-DEOXY-BETA-D-GLUC-4-ENURONOSYL-6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12565]][c] '''+''' 1 [[CPD-13122]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ13212]]
−
* Gene: [[SJ05591]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03650]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08691]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13972]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08692]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ08690]]
+
* Gene: [[SJ15657]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6001]], linoleate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6001 PWY-6001]
+
* [[PWY-6572]], chondroitin sulfate degradation I (bacterial):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5147]], oleate biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5147 PWY-5147]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10867 R10867]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31650 31650]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acyl-coa synthetase|long-chain fatty acid-coa ligase}}
+
{{#set: common-name=unsaturated chondroitin 6-sulfate disaccharide hydrolase}}
−
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: ec-number=ec-3.2.1.180}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:40, 18 December 2020

Reaction RXN-12177

  • direction:
    • left-to-right
  • common-name:
    • unsaturated chondroitin 6-sulfate disaccharide hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6572, chondroitin sulfate degradation I (bacterial):
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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