Difference between revisions of "16S-rRNA-N7-methylguanine527"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] == * direction: ** reversible == Reaction formula == * 1 2-ACETO-LACTATE[c...")
(Created page with "Category:gene == Gene SJ14596 == * transcription-direction: ** negative * right-end-position: ** 164856 * left-end-position: ** 141669 * centisome-position: ** 45.467937...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] ==
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== Gene SJ14596 ==
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* direction:
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* transcription-direction:
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** reversible
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** negative
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== Reaction formula ==
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* right-end-position:
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* 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''<=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[PYRUVATE]][c]
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** 164856
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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== Pathway(s)  ==
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** 141669
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== Reconstruction information  ==
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* centisome-position:
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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** 45.467937   
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== External links  ==
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== Organism(s) associated with this gene  ==
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* LIGAND-RXN:
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* [[S.japonica_carotenoid_curated]]
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** [http://www.genome.jp/dbget-bin/www_bget?R04672 R04672]
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== Reaction(s) associated ==
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* RHEA:
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* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24808 24808]
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** Category: [[annotation]]
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{{#set: direction=reversible}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb gene associated=0}}
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** Category: [[orthology]]
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{{#set: nb pathway associated=0}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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{{#set: reconstruction category=gap-filling}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: reconstruction tool=meneco}}
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== Pathway(s) associated ==
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{{#set: reconstruction comment=added for gapfilling}}
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* [[PWY-4041]]
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7942]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=164856}}
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{{#set: left-end-position=141669}}
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{{#set: centisome-position=45.467937    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=2}}

Revision as of 09:28, 27 August 2019

Gene SJ14596

  • transcription-direction:
    • negative
  • right-end-position:
    • 164856
  • left-end-position:
    • 141669
  • centisome-position:
    • 45.467937

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4041
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7942
    • 1 reactions found over 6 reactions in the full pathway




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