Difference between revisions of "2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction NAD-SYNTH-GLN-RXN == * direction: ** left-to-right * common-name: ** nad+ synthetase, glutamine dependent * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-16395 == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NAD-SYNTH-GLN-RXN ==
+
== Reaction RXN-16395 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad+ synthetase, glutamine dependent
+
** palmitoyl-coa hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
+
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20196]]
+
* Gene: [[SJ09703]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
+
* [[PWY-7723]], bacterial bioluminescence:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5381]], pyridine nucleotide cycling (plants):
 
−
** '''6''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
 
−
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
 
−
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
 
−
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad+ synthetase, glutamine dependent}}
+
{{#set: common-name=palmitoyl-coa hydrolase}}
−
{{#set: ec-number=ec-6.3.5.1}}
+
{{#set: ec-number=ec-3.1.2.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:19, 14 January 2021

Reaction RXN-16395

  • direction:
    • left-to-right
  • common-name:
    • palmitoyl-coa hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7723, bacterial bioluminescence:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN&oldid=90396"