Difference between revisions of "2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE"

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(Created page with "Category:gene == Gene SJ12953 == * transcription-direction: ** positive * right-end-position: ** 25369 * left-end-position: ** 13172 * centisome-position: ** 3.7793882...")
(Created page with "Category:metabolite == Metabolite 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE == * common-name: ** (2r,3s)-3-isopropylmalate * smiles: ** cc(c)c(c([o-])=o)c(c([o-])=o)o * inch...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ12953 ==
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== Metabolite 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE ==
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* transcription-direction:
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* common-name:
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** positive
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** (2r,3s)-3-isopropylmalate
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* right-end-position:
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* smiles:
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** 25369
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** cc(c)c(c([o-])=o)c(c([o-])=o)o
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* left-end-position:
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* inchi-key:
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** 13172
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** rnqhmtfbussbjq-crclsjgqsa-l
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* centisome-position:
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* molecular-weight:
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** 3.7793882   
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** 174.153
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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== Reaction(s) associated ==
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* [[IMDH]]
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* [[GLUTAMIDOTRANS-RXN]]
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* [[IMDHT_LPAREN_3c2hmp_RPAREN_]]
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** Category: [[annotation]]
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* [[RXN-13158]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13163]]
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* [[GLUTAMIN-RXN]]
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* [[RXN-8991]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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* [[PRIBFAICARPISOM-RXN]]
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* [[IMDHT_LPAREN_3c2hmp_RPAREN_]]
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** Category: [[annotation]]
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* [[RXN-13163]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8991]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=(2r,3s)-3-isopropylmalate}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=rnqhmtfbussbjq-crclsjgqsa-l}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=174.153}}
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* [[PRICI]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-17900]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[HISTSYN-PWY]]
 
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
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* [[CITRULBIO-PWY]]
 
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** '''7''' reactions found over '''8''' reactions in the full pathway
 
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* [[GLUTAMINDEG-PWY]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=25369}}
 
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{{#set: left-end-position=13172}}
 
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{{#set: centisome-position=3.7793882    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=3}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE

  • common-name:
    • (2r,3s)-3-isopropylmalate
  • smiles:
    • cc(c)c(c([o-])=o)c(c([o-])=o)o
  • inchi-key:
    • rnqhmtfbussbjq-crclsjgqsa-l
  • molecular-weight:
    • 174.153

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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