Difference between revisions of "2-ISOPROPYLMALATESYN-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.64-RXN 2.5.1.64-RXN] == * direction: ** left-to-right * common-name: ** 2-succinyl-5-enolpyru...") |
(Created page with "Category:reaction == Reaction 2-ISOPROPYLMALATESYN-RXN == * direction: ** left-to-right * common-name: ** 2-isopropylmalate synthase * ec-number: ** [http://enzyme.expasy....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 2-ISOPROPYLMALATESYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** 2- | + | ** 2-isopropylmalate synthase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.3.3.13 ec-2.3.3.13] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[2- | + | * 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ04717]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[LEUSYN-PWY]], L-leucine biosynthesis: |
− | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
+ | * [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR100879 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21525 21525] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P06208 P06208] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58595 Q58595] | ||
+ | ** [http://www.uniprot.org/uniprot/P09151 P09151] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58787 Q58787] | ||
+ | ** [http://www.uniprot.org/uniprot/P94565 P94565] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02141 Q02141] | ||
+ | ** [http://www.uniprot.org/uniprot/P48575 P48575] | ||
+ | ** [http://www.uniprot.org/uniprot/O86511 O86511] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name=2- | + | {{#set: common-name=2-isopropylmalate synthase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.3.3.13}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:21, 18 March 2021
Contents
Reaction 2-ISOPROPYLMALATESYN-RXN
- direction:
- left-to-right
- common-name:
- 2-isopropylmalate synthase
- ec-number:
Reaction formula
- 1 2-KETO-ISOVALERATE[c] + 1 ACETYL-COA[c] + 1 WATER[c] => 1 3-CARBOXY-3-HYDROXY-ISOCAPROATE[c] + 1 CO-A[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ04717
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- LEUSYN-PWY, L-leucine biosynthesis:
- 5 reactions found over 6 reactions in the full pathway
- PWY-6871, 3-methylbutanol biosynthesis (engineered):
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR100879
- RHEA:
- LIGAND-RXN:
- UNIPROT: