Difference between revisions of "2-KETO-ADIPATE-DEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction PPPGO == * direction: ** left-to-right * common-name: ** protoporphyrinogen ix oxidase == Reaction formula == * 3.0 OXYGEN-MOLECULE[h] ''...")
(Created page with "Category:reaction == Reaction 2-KETO-ADIPATE-DEHYDROG-RXN == * direction: ** left-to-right == Reaction formula == * 1 2K-ADIPATE[c] '''+''' 1 CO-A[c] '''+''' 1 N...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PPPGO ==
+
== Reaction 2-KETO-ADIPATE-DEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** protoporphyrinogen ix oxidase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3.0 [[OXYGEN-MOLECULE]][h] '''+''' 1.0 [[PROTOPORPHYRINOGEN]][h] '''=>''' 3.0 [[HYDROGEN-PEROXIDE]][h] '''+''' 1.0 [[PROTOPORPHYRIN_IX]][h]
+
* 1 [[2K-ADIPATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21798]]
+
* Gene: [[SJ19201]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13629]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06474]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway):
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR94818
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30796 30796]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=protoporphyrinogen ix oxidase}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:23, 18 March 2021

Reaction 2-KETO-ADIPATE-DEHYDROG-RXN

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5652, 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-425, L-lysine degradation II (L-pipecolate pathway):
    • 1 reactions found over 9 reactions in the full pathway
  • LYSINE-DEG1-PWY, L-lysine degradation XI (mammalian):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR94818
  • RHEA:
  • LIGAND-RXN:




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