Difference between revisions of "2-Lysophosphatidylcholines"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINASE-RXN ADENOSYLHOMOCYSTEINASE-RXN] == * direction: ** reversible * common-name:...")
(Created page with "Category:metabolite == Metabolite CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P == * common-name: ** 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate * smiles: ** c(op(=o)([o-]...")
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[[Category:reaction]]
+
[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINASE-RXN ADENOSYLHOMOCYSTEINASE-RXN] ==
+
== Metabolite CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P ==
* direction:
 
** reversible
 
 
* common-name:
 
* common-name:
** s-adenosylhomocysteine hydrolase
+
** 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
* ec-number:
+
* smiles:
** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1]
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** c(op(=o)([o-])[o-])c(o)c(o)c(=o)cnc1(c=cc=cc(c(=o)[o-])=1)
== Reaction formula ==
+
* inchi-key:
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[HOMO-CYS]][c]
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** qkmbynrmprkvto-mnovxskesa-k
== Gene(s) associated with this reaction  ==
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* molecular-weight:
* Gene: [[SJ07466]]
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** 346.21
** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[IGPSYN-RXN]]
** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[PRAISOM-RXN]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate}}
== Pathway(s) ==
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{{#set: inchi-key=inchikey=qkmbynrmprkvto-mnovxskesa-k}}
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
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{{#set: molecular-weight=346.21}}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21711 21711]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00192 R00192]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P10760 P10760]
 
** [http://www.uniprot.org/uniprot/P10819 P10819]
 
** [http://www.uniprot.org/uniprot/P23526 P23526]
 
** [http://www.uniprot.org/uniprot/P28183 P28183]
 
** [http://www.uniprot.org/uniprot/P50250 P50250]
 
** [http://www.uniprot.org/uniprot/P60176 P60176]
 
** [http://www.uniprot.org/uniprot/Q58783 Q58783]
 
** [http://www.uniprot.org/uniprot/O23255 O23255]
 
** [http://www.uniprot.org/uniprot/O27673 O27673]
 
** [http://www.uniprot.org/uniprot/O29376 O29376]
 
** [http://www.uniprot.org/uniprot/O28279 O28279]
 
** [http://www.uniprot.org/uniprot/P51893 P51893]
 
** [http://www.uniprot.org/uniprot/P50245 P50245]
 
** [http://www.uniprot.org/uniprot/P26799 P26799]
 
** [http://www.uniprot.org/uniprot/P35007 P35007]
 
** [http://www.uniprot.org/uniprot/P39954 P39954]
 
** [http://www.uniprot.org/uniprot/P50252 P50252]
 
** [http://www.uniprot.org/uniprot/P50249 P50249]
 
** [http://www.uniprot.org/uniprot/P74008 P74008]
 
** [http://www.uniprot.org/uniprot/P32112 P32112]
 
** [http://www.uniprot.org/uniprot/Q9UG84 Q9UG84]
 
** [http://www.uniprot.org/uniprot/Q01781 Q01781]
 
** [http://www.uniprot.org/uniprot/P27604 P27604]
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: common-name=s-adenosylhomocysteine hydrolase}}
 
{{#set: ec-number=ec-3.3.1.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Revision as of 20:37, 18 December 2020

Metabolite CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P

  • common-name:
    • 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
  • smiles:
    • c(op(=o)([o-])[o-])c(o)c(o)c(=o)cnc1(c=cc=cc(c(=o)[o-])=1)
  • inchi-key:
    • qkmbynrmprkvto-mnovxskesa-k
  • molecular-weight:
    • 346.21

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality