Difference between revisions of "2-METHYLMALEATE"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** left-to-right * common-na...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** left-to-right * common-name: ** 3-ketoacyl-coa thiolase **...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrate reductase
+
** 3-ketoacyl-coa thiolase
−
** nitrate reductase (nadh)
+
** acetyl-coa c-acyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.1.1 ec-1.7.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-15687]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15446]]
+
* Gene: [[SJ21818]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ09371]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00644]]
+
* Gene: [[SJ14898]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21817]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17915 17915]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q39607 Q39607]
 
−
** [http://www.uniprot.org/uniprot/Q41201 Q41201]
 
−
** [http://www.uniprot.org/uniprot/P17569 P17569]
 
−
** [http://www.uniprot.org/uniprot/P54233 P54233]
 
−
** [http://www.uniprot.org/uniprot/P36841 P36841]
 
−
** [http://www.uniprot.org/uniprot/P27967 P27967]
 
−
** [http://www.uniprot.org/uniprot/P27969 P27969]
 
−
** [http://www.uniprot.org/uniprot/P11035 P11035]
 
−
** [http://www.uniprot.org/uniprot/P08509 P08509]
 
−
** [http://www.uniprot.org/uniprot/P11605 P11605]
 
−
** [http://www.uniprot.org/uniprot/P23312 P23312]
 
−
** [http://www.uniprot.org/uniprot/P17570 P17570]
 
−
** [http://www.uniprot.org/uniprot/P16081 P16081]
 
−
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
 
−
** [http://www.uniprot.org/uniprot/P39865 P39865]
 
−
** [http://www.uniprot.org/uniprot/P11832 P11832]
 
−
** [http://www.uniprot.org/uniprot/P39869 P39869]
 
−
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
 
−
** [http://www.uniprot.org/uniprot/P43101 P43101]
 
−
** [http://www.uniprot.org/uniprot/P43100 P43100]
 
−
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
 
−
** [http://www.uniprot.org/uniprot/P39866 P39866]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrate reductase|nitrate reductase (nadh)}}
+
{{#set: common-name=3-ketoacyl-coa thiolase|acetyl-coa c-acyltransferase}}
−
{{#set: ec-number=ec-1.7.1.1}}
+
{{#set: ec-number=ec-2.3.1.16}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction RXN-14799

  • direction:
    • left-to-right
  • common-name:
    • 3-ketoacyl-coa thiolase
    • acetyl-coa c-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2-METHYLMALEATE&oldid=21814"