Difference between revisions of "2-OCTAPRENYL-6-OHPHENOL-METHY-RXN"

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(Created page with "Category:reaction == Reaction OHMETHYLBILANESYN-RXN == * direction: ** left-to-right * common-name: ** hydroxymethylbilane synthase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN == * direction: ** left-to-right * common-name: ** 2-octaprenyl-6-hydroxyphenyl methylase ** 2-octaprenyl-6...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OHMETHYLBILANESYN-RXN ==
+
== Reaction 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hydroxymethylbilane synthase
+
** 2-octaprenyl-6-hydroxyphenyl methylase
 +
** 2-octaprenyl-6-hydroxyphenol methylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61]
+
** [http://enzyme.expasy.org/EC/2.1.1.222 ec-2.1.1.222]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
+
* 1 [[2-OCTAPRENYL-6-HYDROXYPHENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-OCTAPRENYL-6-METHOXYPHENOL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02237]]
+
* Gene: [[SJ16864]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13007]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
+
* [[PWY-6708]], ubiquinol-8 biosynthesis (early decarboxylation):
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR102170
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27771 27771]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04988 R04988]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
 
−
** [http://www.uniprot.org/uniprot/O29026 O29026]
 
−
** [http://www.uniprot.org/uniprot/P64336 P64336]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
 
−
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
 
−
** [http://www.uniprot.org/uniprot/P28464 P28464]
 
−
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
 
−
** [http://www.uniprot.org/uniprot/P56140 P56140]
 
−
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
 
−
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
 
−
** [http://www.uniprot.org/uniprot/O26960 O26960]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
 
−
** [http://www.uniprot.org/uniprot/P06983 P06983]
 
−
** [http://www.uniprot.org/uniprot/P13446 P13446]
 
−
** [http://www.uniprot.org/uniprot/P08397 P08397]
 
−
** [http://www.uniprot.org/uniprot/P22907 P22907]
 
−
** [http://www.uniprot.org/uniprot/P19356 P19356]
 
−
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
 
−
** [http://www.uniprot.org/uniprot/P40129 P40129]
 
−
** [http://www.uniprot.org/uniprot/P30527 P30527]
 
−
** [http://www.uniprot.org/uniprot/P28789 P28789]
 
−
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
 
−
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
 
−
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
 
−
** [http://www.uniprot.org/uniprot/P73660 P73660]
 
−
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
 
−
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
 
−
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroxymethylbilane synthase}}
+
{{#set: common-name=2-octaprenyl-6-hydroxyphenol methylase|2-octaprenyl-6-hydroxyphenyl methylase}}
−
{{#set: ec-number=ec-2.5.1.61}}
+
{{#set: ec-number=ec-2.1.1.222}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-octaprenyl-6-hydroxyphenyl methylase
    • 2-octaprenyl-6-hydroxyphenol methylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6708, ubiquinol-8 biosynthesis (early decarboxylation):
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102170
  • RHEA:
  • LIGAND-RXN:





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