Difference between revisions of "2-OCTAPRENYL-6-OHPHENOL-METHY-RXN"

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(Created page with "Category:reaction == Reaction OHMETHYLBILANESYN-RXN == * direction: ** left-to-right * common-name: ** hydroxymethylbilane synthase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN-11026-PALMITYL-COA/OXYGEN-MOLECULE//CPD0-2117/HYDROGEN-PEROXIDE.58. == * direction: ** left-to-right == Reaction formula == * 1.0 OXYGE...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction OHMETHYLBILANESYN-RXN ==
+
== Reaction RXN-11026-PALMITYL-COA/OXYGEN-MOLECULE//CPD0-2117/HYDROGEN-PEROXIDE.58. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** hydroxymethylbilane synthase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
+
* 1.0 [[OXYGEN-MOLECULE]][c] '''+''' 1.0 [[PALMITYL-COA]][c] '''=>''' 1.0 [[CPD0-2117]][c] '''+''' 1.0 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02237]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
 
−
** [http://www.uniprot.org/uniprot/O29026 O29026]
 
−
** [http://www.uniprot.org/uniprot/P64336 P64336]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
 
−
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
 
−
** [http://www.uniprot.org/uniprot/P28464 P28464]
 
−
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
 
−
** [http://www.uniprot.org/uniprot/P56140 P56140]
 
−
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
 
−
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
 
−
** [http://www.uniprot.org/uniprot/O26960 O26960]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
 
−
** [http://www.uniprot.org/uniprot/P06983 P06983]
 
−
** [http://www.uniprot.org/uniprot/P13446 P13446]
 
−
** [http://www.uniprot.org/uniprot/P08397 P08397]
 
−
** [http://www.uniprot.org/uniprot/P22907 P22907]
 
−
** [http://www.uniprot.org/uniprot/P19356 P19356]
 
−
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
 
−
** [http://www.uniprot.org/uniprot/P40129 P40129]
 
−
** [http://www.uniprot.org/uniprot/P30527 P30527]
 
−
** [http://www.uniprot.org/uniprot/P28789 P28789]
 
−
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
 
−
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
 
−
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
 
−
** [http://www.uniprot.org/uniprot/P73660 P73660]
 
−
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
 
−
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
 
−
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroxymethylbilane synthase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-2.5.1.61}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=previous_meneco}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 15:03, 5 January 2021

Reaction RXN-11026-PALMITYL-COA/OXYGEN-MOLECULE//CPD0-2117/HYDROGEN-PEROXIDE.58.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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