Difference between revisions of "2.1.1.114-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] == * direction: ** left-to-right * common-name: ** hydroxymethylpy...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10979 RXN-10979] == * direction: ** left-to-right * common-name: ** 5-diphosphoinositol-pentaki...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10979 RXN-10979] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hydroxymethylpyrimidine kinase
+
** 5-diphosphoinositol-pentakisphosphate 3-kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.49 ec-2.7.1.49]
+
** [http://enzyme.expasy.org/EC/2.7.4.24 ec-2.7.4.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[5-DIPHOSPHO-1D-MYO-INOSITOL-12346P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-11939]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18183]]
+
* Gene: [[SJ02918]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02917]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06607]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
+
* [[PWY-6369]], inositol diphosphates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6369 PWY-6369]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23097 23097]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03471 R03471]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O48881 O48881]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroxymethylpyrimidine kinase}}
+
{{#set: common-name=5-diphosphoinositol-pentakisphosphate 3-kinase}}
−
{{#set: ec-number=ec-2.7.1.49}}
+
{{#set: ec-number=ec-2.7.4.24}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-10979

  • direction:
    • left-to-right
  • common-name:
    • 5-diphosphoinositol-pentakisphosphate 3-kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6369, inositol diphosphates biosynthesis: PWY-6369
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.1.1.114-RXN&oldid=37027"