Difference between revisions of "2.1.1.137-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number:...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R163-RXN R163-RXN] == * direction: ** reversible == Reaction formula == * 1 PAPS[c] '''+''' 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R163-RXN R163-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** heme oxygenase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[PAPS]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20370]]
+
* Gene: [[SJ05836]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15444]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00508 R00508]
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=heme oxygenase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-1.14.15.20}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=7}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction R163-RXN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.1.1.137-RXN&oldid=24069"