Difference between revisions of "2.1.1.138-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] == * direction: ** reversible * common...")
(Created page with "Category:reaction == Reaction RXN-16130 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] ==
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== Reaction RXN-16130 ==
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
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* common-name:
 
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** 3-oxoacyl coa thiolase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9]
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** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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* 1 [[CPD-17382]][c] '''=>''' 1 [[CPD-17383]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09371]]
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* Gene: [[SJ00783]]
−
** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06882]]
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* Gene: [[SJ21818]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14898]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
−
** '''5''' reactions found over '''6''' reactions in the full pathway
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** '''8''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5109]], fermentation to 2-methylbutanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
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{{#set: ec-number=ec-4.2.1.134}}
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* LIGAND-RXN:
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{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
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{{#set: nb pathway associated=1}}
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{{#set: direction=reversible}}
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{{#set: reconstruction category=annotation}}
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{{#set: common-name=3-oxoacyl coa thiolase}}
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{{#set: reconstruction tool=pathwaytools}}
−
{{#set: ec-number=ec-2.3.1.9}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:43, 18 December 2020

Reaction RXN-16130

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.1.1.138-RXN&oldid=50714"