Difference between revisions of "2.1.1.5-RXN"

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(Created page with "Category:reaction == Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 4-kinase ** 1-phosphatidylinositol...")
(Created page with "Category:reaction == Reaction 2.1.1.5-RXN == * direction: ** left-to-right * common-name: ** betaine-homocysteine s-methyltransferase * ec-number: ** [http://enzyme.expasy...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN ==
+
== Reaction 2.1.1.5-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphatidylinositol 4-kinase
+
** betaine-homocysteine s-methyltransferase
−
** 1-phosphatidylinositol 4-kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.67 ec-2.7.1.67]
+
** [http://enzyme.expasy.org/EC/2.1.1.5 ec-2.1.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1108]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[BETAINE]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[MET]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07112]]
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* Gene: [[SJ05323]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15728]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12598]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19880]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21404]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03632]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ20688]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
+
* [[PWY-3661]], glycine betaine degradation I:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis:
+
* [[PWY-3661-1]], glycine betaine degradation II (mammalian):
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96250
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19878 19878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22337 22337]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02821 R02821]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P18688 P18688]
 
−
** [http://www.uniprot.org/uniprot/P12798 P12798]
 
−
** [http://www.uniprot.org/uniprot/P39104 P39104]
 
−
** [http://www.uniprot.org/uniprot/P42356 P42356]
 
−
** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
 
−
** [http://www.uniprot.org/uniprot/P37297 P37297]
 
−
** [http://www.uniprot.org/uniprot/Q28925 Q28925]
 
−
** [http://www.uniprot.org/uniprot/O81281 O81281]
 
−
** [http://www.uniprot.org/uniprot/O81129 O81129]
 
−
** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphatidylinositol 4-kinase|1-phosphatidylinositol 4-kinase}}
+
{{#set: common-name=betaine-homocysteine s-methyltransferase}}
−
{{#set: ec-number=ec-2.7.1.67}}
+
{{#set: ec-number=ec-2.1.1.5}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 2.1.1.5-RXN

  • direction:
    • left-to-right
  • common-name:
    • betaine-homocysteine s-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3661, glycine betaine degradation I:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-3661-1, glycine betaine degradation II (mammalian):
    • 2 reactions found over 4 reactions in the full pathway
  • ADENOSYLHOMOCYSCAT-PWY, L-methionine salvage from L-homocysteine:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96250
  • RHEA:
  • LIGAND-RXN:





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