Difference between revisions of "2.1.1.72-RXN"

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(Created page with "Category:reaction == Reaction INORGPYROPHOSPHAT-RXN == * direction: ** left-to-right * common-name: ** inorganic pyrophosphatase ** inorganic diphosphatase * ec-number: **...")
(Created page with "Category:reaction == Reaction 2.1.1.72-RXN == * direction: ** left-to-right * common-name: ** site-specific dna-methyltransferase (adenine-specific) * ec-number: ** [http:...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction INORGPYROPHOSPHAT-RXN ==
+
== Reaction 2.1.1.72-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** inorganic pyrophosphatase
+
** site-specific dna-methyltransferase (adenine-specific)
−
** inorganic diphosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.1 ec-3.6.1.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.72 ec-2.1.1.72]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PPI]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[Pi]][c]
+
* 1 [[DNA-Adenines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-Containing-N6-Methyladenine]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09110]]
−
* Gene: [[SJ11426]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11196]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06186]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07746]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19856]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19765]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09890]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10687]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17386]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17098]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17991]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21090]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7805]], (aminomethyl)phosphonate degradation:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7807]], glyphosate degradation III:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR100808
+
* METANETX-RXN : MNXR107854
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24576 24576]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15198 15198]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00004 R00004]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02961 R02961]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21616 P21616]
+
** [http://www.uniprot.org/uniprot/Q7B7V5 Q7B7V5]
−
** [http://www.uniprot.org/uniprot/P31414 P31414]
+
** [http://www.uniprot.org/uniprot/P44414 P44414]
−
** [http://www.uniprot.org/uniprot/P28239 P28239]
+
** [http://www.uniprot.org/uniprot/Q57168 Q57168]
−
** [http://www.uniprot.org/uniprot/P37980 P37980]
+
** [http://www.uniprot.org/uniprot/Q9PIS1 Q9PIS1]
−
** [http://www.uniprot.org/uniprot/P84491 P84491]
+
** [http://www.uniprot.org/uniprot/P44431 P44431]
−
** [http://www.uniprot.org/uniprot/O59570 O59570]
+
** [http://www.uniprot.org/uniprot/P95510 P95510]
−
** [http://www.uniprot.org/uniprot/Q9S941 Q9S941]
+
** [http://www.uniprot.org/uniprot/P29749 P29749]
−
** [http://www.uniprot.org/uniprot/Q9S939 Q9S939]
+
** [http://www.uniprot.org/uniprot/P14385 P14385]
−
** [http://www.uniprot.org/uniprot/Q9S936 Q9S936]
+
** [http://www.uniprot.org/uniprot/P43422 P43422]
−
** [http://www.uniprot.org/uniprot/O26363 O26363]
+
** [http://www.uniprot.org/uniprot/Q47911 Q47911]
−
** [http://www.uniprot.org/uniprot/Q9S940 Q9S940]
+
** [http://www.uniprot.org/uniprot/P21311 P21311]
−
** [http://www.uniprot.org/uniprot/Q9S938 Q9S938]
+
** [http://www.uniprot.org/uniprot/P14751 P14751]
−
** [http://www.uniprot.org/uniprot/Q9S937 Q9S937]
+
** [http://www.uniprot.org/uniprot/P14827 P14827]
−
** [http://www.uniprot.org/uniprot/Q9PHM9 Q9PHM9]
+
** [http://www.uniprot.org/uniprot/P25240 P25240]
−
** [http://www.uniprot.org/uniprot/Q9UY24 Q9UY24]
+
** [http://www.uniprot.org/uniprot/P25239 P25239]
−
** [http://www.uniprot.org/uniprot/Q9JVG3 Q9JVG3]
+
** [http://www.uniprot.org/uniprot/P29538 P29538]
−
** [http://www.uniprot.org/uniprot/P47593 P47593]
+
** [http://www.uniprot.org/uniprot/Q03055 Q03055]
−
** [http://www.uniprot.org/uniprot/Q974Y8 Q974Y8]
+
** [http://www.uniprot.org/uniprot/Q51829 Q51829]
−
** [http://www.uniprot.org/uniprot/O05724 O05724]
+
** [http://www.uniprot.org/uniprot/P25238 P25238]
−
** [http://www.uniprot.org/uniprot/P19514 P19514]
+
** [http://www.uniprot.org/uniprot/P35516 P35516]
−
** [http://www.uniprot.org/uniprot/P00817 P00817]
+
** [http://www.uniprot.org/uniprot/P33563 P33563]
−
** [http://www.uniprot.org/uniprot/P0A7A9 P0A7A9]
+
** [http://www.uniprot.org/uniprot/P43641 P43641]
−
** [http://www.uniprot.org/uniprot/P13998 P13998]
+
** [http://www.uniprot.org/uniprot/P45454 P45454]
−
** [http://www.uniprot.org/uniprot/P19117 P19117]
+
** [http://www.uniprot.org/uniprot/P50193 P50193]
−
** [http://www.uniprot.org/uniprot/P21216 P21216]
+
** [http://www.uniprot.org/uniprot/Q56004 Q56004]
−
** [http://www.uniprot.org/uniprot/Q9R5T3 Q9R5T3]
+
** [http://www.uniprot.org/uniprot/P73682 P73682]
−
** [http://www.uniprot.org/uniprot/P37981 P37981]
+
** [http://www.uniprot.org/uniprot/P31118 P31118]
−
** [http://www.uniprot.org/uniprot/Q43801 Q43801]
+
** [http://www.uniprot.org/uniprot/O41063 O41063]
−
** [http://www.uniprot.org/uniprot/Q43798 Q43798]
+
** [http://www.uniprot.org/uniprot/P12427 P12427]
−
** [http://www.uniprot.org/uniprot/Q43797 Q43797]
+
** [http://www.uniprot.org/uniprot/P04392 P04392]
−
** [http://www.uniprot.org/uniprot/P50308 P50308]
+
** [http://www.uniprot.org/uniprot/P0AEE8 P0AEE8]
−
** [http://www.uniprot.org/uniprot/Q43796 Q43796]
+
** [http://www.uniprot.org/uniprot/P08957 P08957]
−
** [http://www.uniprot.org/uniprot/P93409 P93409]
+
** [http://www.uniprot.org/uniprot/P00472 P00472]
−
** [http://www.uniprot.org/uniprot/Q8H616 Q8H616]
+
** [http://www.uniprot.org/uniprot/P04393 P04393]
−
** [http://www.uniprot.org/uniprot/P93410 P93410]
+
** [http://www.uniprot.org/uniprot/P00473 P00473]
−
** [http://www.uniprot.org/uniprot/P75250 P75250]
+
** [http://www.uniprot.org/uniprot/P24582 P24582]
−
** [http://www.uniprot.org/uniprot/Q49071 Q49071]
+
** [http://www.uniprot.org/uniprot/P00474 P00474]
−
** [http://www.uniprot.org/uniprot/O48556 O48556]
+
** [http://www.uniprot.org/uniprot/P04043 P04043]
−
** [http://www.uniprot.org/uniprot/O22537 O22537]
 
−
** [http://www.uniprot.org/uniprot/O82793 O82793]
 
−
** [http://www.uniprot.org/uniprot/O23979 O23979]
 
−
** [http://www.uniprot.org/uniprot/O49949 O49949]
 
−
** [http://www.uniprot.org/uniprot/Q43187 Q43187]
 
−
** [http://www.uniprot.org/uniprot/O22124 O22124]
 
−
** [http://www.uniprot.org/uniprot/Q42650 Q42650]
 
−
** [http://www.uniprot.org/uniprot/Q42651 Q42651]
 
−
** [http://www.uniprot.org/uniprot/O65151 O65151]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=inorganic diphosphatase|inorganic pyrophosphatase}}
+
{{#set: common-name=site-specific dna-methyltransferase (adenine-specific)}}
−
{{#set: ec-number=ec-3.6.1.1}}
+
{{#set: ec-number=ec-2.1.1.72}}
−
{{#set: nb gene associated=12}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 2.1.1.72-RXN

  • direction:
    • left-to-right
  • common-name:
    • site-specific dna-methyltransferase (adenine-specific)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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