Difference between revisions of "2.3.1.23-RXN"

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(Created page with "Category:reaction == Reaction RXN-16101 == * direction: ** left-to-right * common-name: ** icosatrienoyl-lipid 8-desaturase * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:reaction == Reaction PSERTRANSAM-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16101 ==
+
== Reaction PSERTRANSAM-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** icosatrienoyl-lipid 8-desaturase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.4 ec-1.14.19.4]
+
** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-17352]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17281]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[3-P-SERINE]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00350]]
+
* Gene: [[SJ02143]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes):
+
* [[SERSYN-PWY]], L-serine biosynthesis I:
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46797 46797]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14332 14332]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: common-name=icosatrienoyl-lipid 8-desaturase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04173 R04173]
−
{{#set: ec-number=ec-1.14.19.4}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10658 P10658]
 +
** [http://www.uniprot.org/uniprot/P23721 P23721]
 +
** [http://www.uniprot.org/uniprot/Q9PIH3 Q9PIH3]
 +
** [http://www.uniprot.org/uniprot/Q9CHW5 Q9CHW5]
 +
** [http://www.uniprot.org/uniprot/P44336 P44336]
 +
** [http://www.uniprot.org/uniprot/O34370 O34370]
 +
** [http://www.uniprot.org/uniprot/P62676 P62676]
 +
** [http://www.uniprot.org/uniprot/P33330 P33330]
 +
** [http://www.uniprot.org/uniprot/P19689 P19689]
 +
{{#set: direction=reversible}}
 +
{{#set: ec-number=ec-2.6.1.52}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:21, 15 January 2021

Reaction PSERTRANSAM-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SERSYN-PWY, L-serine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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