Difference between revisions of "2.4.1.101-RXN"

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(Created page with "Category:reaction == Reaction PABASYN-RXN == * direction: ** reversible * common-name: ** 4-amino-4-deoxychorismate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:reaction == Reaction RXN66-221 == * direction: ** left-to-right * common-name: ** dopa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PABASYN-RXN ==
+
== Reaction RXN66-221 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-amino-4-deoxychorismate synthase
+
** dopa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.85 ec-2.6.1.85]
+
** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHORISMATE]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[4-AMINO-4-DEOXYCHORISMATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DOPAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10268]]
+
* Gene: [[SJ11952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6543]], 4-aminobenzoate biosynthesis:
+
* [[PWY66-301]], catecholamine biosynthesis:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5426]], betaxanthin biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5403]], betaxanthin biosynthesis (via dopamine):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I:
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11675 11675]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12273 12273]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01716 R01716]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02080 R02080]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=4-amino-4-deoxychorismate synthase}}
+
{{#set: common-name=dopa decarboxylase}}
−
{{#set: ec-number=ec-2.6.1.85}}
+
{{#set: ec-number=ec-4.1.1.28}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:36, 5 January 2021

Reaction RXN66-221

  • direction:
    • left-to-right
  • common-name:
    • dopa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-301, catecholamine biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5426, betaxanthin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5403, betaxanthin biosynthesis (via dopamine):
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3581, (S)-reticuline biosynthesis I:
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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