Difference between revisions of "2.4.1.134-RXN"

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(Created page with "Category:reaction == Reaction 2.1.1.72-RXN == * direction: ** left-to-right * common-name: ** site-specific dna-methyltransferase (adenine-specific) * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.1.1.72-RXN ==
+
== Reaction DAPASYN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** site-specific dna-methyltransferase (adenine-specific)
+
** 7,8-diaminopelargonic acid synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.72 ec-2.1.1.72]
+
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-Adenines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-Containing-N6-Methyladenine]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09110]]
+
* Gene: [[SJ14599]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15198 15198]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02961 R02961]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7B7V5 Q7B7V5]
+
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
−
** [http://www.uniprot.org/uniprot/P44414 P44414]
+
** [http://www.uniprot.org/uniprot/P53555 P53555]
−
** [http://www.uniprot.org/uniprot/Q57168 Q57168]
+
** [http://www.uniprot.org/uniprot/P44426 P44426]
−
** [http://www.uniprot.org/uniprot/Q9PIS1 Q9PIS1]
+
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
−
** [http://www.uniprot.org/uniprot/P44431 P44431]
+
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
−
** [http://www.uniprot.org/uniprot/P95510 P95510]
+
** [http://www.uniprot.org/uniprot/P46395 P46395]
−
** [http://www.uniprot.org/uniprot/P29749 P29749]
+
** [http://www.uniprot.org/uniprot/P53656 P53656]
−
** [http://www.uniprot.org/uniprot/P14385 P14385]
+
** [http://www.uniprot.org/uniprot/P22805 P22805]
−
** [http://www.uniprot.org/uniprot/P43422 P43422]
+
** [http://www.uniprot.org/uniprot/P45488 P45488]
−
** [http://www.uniprot.org/uniprot/Q47911 Q47911]
+
** [http://www.uniprot.org/uniprot/P12995 P12995]
−
** [http://www.uniprot.org/uniprot/P21311 P21311]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P14751 P14751]
+
{{#set: common-name=7,8-diaminopelargonic acid synthase}}
−
** [http://www.uniprot.org/uniprot/P14827 P14827]
+
{{#set: ec-number=ec-2.6.1.62}}
−
** [http://www.uniprot.org/uniprot/P25240 P25240]
 
−
** [http://www.uniprot.org/uniprot/P25239 P25239]
 
−
** [http://www.uniprot.org/uniprot/P29538 P29538]
 
−
** [http://www.uniprot.org/uniprot/Q03055 Q03055]
 
−
** [http://www.uniprot.org/uniprot/Q51829 Q51829]
 
−
** [http://www.uniprot.org/uniprot/P25238 P25238]
 
−
** [http://www.uniprot.org/uniprot/P35516 P35516]
 
−
** [http://www.uniprot.org/uniprot/P33563 P33563]
 
−
** [http://www.uniprot.org/uniprot/P43641 P43641]
 
−
** [http://www.uniprot.org/uniprot/P45454 P45454]
 
−
** [http://www.uniprot.org/uniprot/P50193 P50193]
 
−
** [http://www.uniprot.org/uniprot/Q56004 Q56004]
 
−
** [http://www.uniprot.org/uniprot/P73682 P73682]
 
−
** [http://www.uniprot.org/uniprot/P31118 P31118]
 
−
** [http://www.uniprot.org/uniprot/O41063 O41063]
 
−
** [http://www.uniprot.org/uniprot/P12427 P12427]
 
−
** [http://www.uniprot.org/uniprot/P04392 P04392]
 
−
** [http://www.uniprot.org/uniprot/P0AEE8 P0AEE8]
 
−
** [http://www.uniprot.org/uniprot/P08957 P08957]
 
−
** [http://www.uniprot.org/uniprot/P00472 P00472]
 
−
** [http://www.uniprot.org/uniprot/P04393 P04393]
 
−
** [http://www.uniprot.org/uniprot/P00473 P00473]
 
−
** [http://www.uniprot.org/uniprot/P24582 P24582]
 
−
** [http://www.uniprot.org/uniprot/P00474 P00474]
 
−
** [http://www.uniprot.org/uniprot/P04043 P04043]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=site-specific dna-methyltransferase (adenine-specific)}}
 
−
{{#set: ec-number=ec-2.1.1.72}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:04, 14 January 2021

Reaction DAPASYN-RXN

  • direction:
    • reversible
  • common-name:
    • 7,8-diaminopelargonic acid synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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