Difference between revisions of "2.4.1.134-RXN"

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(Created page with "Category:reaction == Reaction RXN-14903 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.5.5.2 ec-1.5.5.2] == Reaction formula == * 1 ETR-...")
(Created page with "Category:reaction == Reaction PYRIDOXKIN-RXN == * direction: ** left-to-right * common-name: ** pyridoxal kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14903 ==
+
== Reaction PYRIDOXKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** pyridoxal kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.5.2 ec-1.5.5.2]
+
** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09783]]
+
* Gene: [[SJ14436]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08289]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis:
+
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PROUT-PWY]], L-proline degradation:
+
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis:
+
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103361
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23785 23785]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10225 10225]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
+
** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
−
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
+
** [http://www.uniprot.org/uniprot/P44690 P44690]
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
+
** [http://www.uniprot.org/uniprot/P77150 P77150]
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
 
−
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
 
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
 
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 
−
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.5.5.2}}
+
{{#set: common-name=pyridoxal kinase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.7.1.35}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction PYRIDOXKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • pyridoxal kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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