Difference between revisions of "2.4.1.201-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11887 RXN-11887] == * direction: ** left-to-right * common-name: ** 5α-cholest-7,24-dien-...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48. RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11887 RXN-11887] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48. RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 5α-cholest-7,24-dien-3β-ol,nad(p)h:oxygen 5-oxidoreductase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.14.19.20 ec-1.14.19.20]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8646]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[CO-A]][c] '''+''' 1.0 [[R-2-HYDROXYSTEARATE]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[CPD-14717]][c] '''+''' 1.0 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11625]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00834]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
 
−
** '''14''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34004 34004]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=5α-cholest-7,24-dien-3β-ol,nad(p)h:oxygen 5-oxidoreductase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-1.14.19.20}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 14:26, 26 August 2019

Reaction RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.4.1.201-RXN&oldid=23706"