Difference between revisions of "2.4.1.46-RXN"

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(Created page with "Category:reaction == Reaction RXN-12263 == * direction: ** left-to-right * common-name: ** farnesyl-diphosphate farnesyltransferase ** presqualene diphosphate synthase * e...")
(Created page with "Category:reaction == Reaction 2.4.1.46-RXN == * direction: ** left-to-right * common-name: ** 1,2-diacylglycerol 3-beta-galactosyltransferase ** monogalactosyldiacylglycer...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12263 ==
+
== Reaction 2.4.1.46-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** farnesyl-diphosphate farnesyltransferase
+
** 1,2-diacylglycerol 3-beta-galactosyltransferase
−
** presqualene diphosphate synthase
+
** monogalactosyldiacylglycerol synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.103 ec-2.5.1.103]
+
** [http://enzyme.expasy.org/EC/2.4.1.46 ec-2.4.1.46]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-465]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13532]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11730]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01255]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14527]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02885]]
+
* Gene: [[SJ02446]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis:
+
* [[PWY-401]], galactolipid biosynthesis I:
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5875]], staphyloxanthin biosynthesis:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7072]], hopanoid biosynthesis (bacteria):
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR107671
−
* METANETX-RXN : MNXR103264
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14946 14946]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00702 R00702]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02691 R02691]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O69445 O69445]
+
** [http://www.uniprot.org/uniprot/O81770 O81770]
−
** [http://www.uniprot.org/uniprot/P36596 P36596]
+
** [http://www.uniprot.org/uniprot/P93115 P93115]
−
** [http://www.uniprot.org/uniprot/O65688 O65688]
+
** [http://www.uniprot.org/uniprot/O82730 O82730]
−
** [http://www.uniprot.org/uniprot/O23118 O23118]
 
−
** [http://www.uniprot.org/uniprot/O22107 O22107]
 
−
** [http://www.uniprot.org/uniprot/Q40472 Q40472]
 
−
** [http://www.uniprot.org/uniprot/O22106 O22106]
 
−
** [http://www.uniprot.org/uniprot/P53800 P53800]
 
−
** [http://www.uniprot.org/uniprot/P53799 P53799]
 
−
** [http://www.uniprot.org/uniprot/P53798 P53798]
 
−
** [http://www.uniprot.org/uniprot/P29704 P29704]
 
−
** [http://www.uniprot.org/uniprot/Q04903 Q04903]
 
−
** [http://www.uniprot.org/uniprot/Q42761 Q42761]
 
−
** [http://www.uniprot.org/uniprot/Q42760 Q42760]
 
−
** [http://www.uniprot.org/uniprot/P37268 P37268]
 
−
** [http://www.uniprot.org/uniprot/Q02769 Q02769]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=presqualene diphosphate synthase|farnesyl-diphosphate farnesyltransferase}}
+
{{#set: common-name=monogalactosyldiacylglycerol synthase|1,2-diacylglycerol 3-beta-galactosyltransferase}}
−
{{#set: ec-number=ec-2.5.1.103}}
+
{{#set: ec-number=ec-2.4.1.46}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 2.4.1.46-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1,2-diacylglycerol 3-beta-galactosyltransferase
    • monogalactosyldiacylglycerol synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-401, galactolipid biosynthesis I:
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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