Difference between revisions of "2.4.1.67-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-475...")
(Created page with "Category:reaction == Reaction RXN-16134 == * direction: ** left-to-right * common-name: ** (6z,9z,12z,15z,18z,21z)-tetracosahexaenoyl-coa oxidase ** acyl-coa oxidase * ec-...")
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY] ==
+
== Reaction RXN-16134 ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
+
** left-to-right
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33630 tax-33630]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
−
** heme b biosynthesis ii (anaerobic)
+
** (6z,9z,12z,15z,18z,21z)-tetracosahexaenoyl-coa oxidase
−
== Reaction(s) found ==
+
** acyl-coa oxidase
−
* [[HEMN-RXN]]
+
* ec-number:
−
* [[PROTOHEMEFERROCHELAT-RXN]]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
−
* [[UROGENDECARBOX-RXN]]
+
== Reaction formula ==
−
== Reaction(s) not found ==
+
* 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6259 RXN0-6259]
+
== Gene(s) associated with this reaction  ==
−
{{#set: taxonomic-range=tax-33630|tax-4751|tax-2}}
+
* Gene: [[SJ19669]]
−
{{#set: common-name=heme b biosynthesis ii (anaerobic)}}
+
** Category: [[orthology]]
−
{{#set: nb reaction found=3}}
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
{{#set: completion rate=0.75}}
+
* Gene: [[SJ07452]]
−
{{#set: nb total reaction=4}}
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03090]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13468]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07451]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
== Pathway(s) ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=acyl-coa oxidase|(6z,9z,12z,15z,18z,21z)-tetracosahexaenoyl-coa oxidase}}
 +
{{#set: ec-number=ec-1.3.3.6}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:43, 18 December 2020

Reaction RXN-16134

  • direction:
    • left-to-right
  • common-name:
    • (6z,9z,12z,15z,18z,21z)-tetracosahexaenoyl-coa oxidase
    • acyl-coa oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.4.1.67-RXN&oldid=50613"