Difference between revisions of "2.4.1.82-RXN"

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(Created page with "Category:reaction == Reaction RXN-14384 == * direction: ** left-to-right * common-name: ** [cysteine desulfurase]-s-sulfanylcysteine:[acceptor protein]-cysteine sulfurtran...")
(Created page with "Category:reaction == Reaction 2.4.1.82-RXN == * direction: ** left-to-right * common-name: ** raffinose synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.82 ec-2...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14384 ==
+
== Reaction 2.4.1.82-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** [cysteine desulfurase]-s-sulfanylcysteine:[acceptor protein]-cysteine sulfurtransferase
+
** raffinose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/2.4.1.82 ec-2.4.1.82]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-CD-Apo-SP-Complex]][c] '''=>''' 1 [[CD-S-SP-Complex]][c]
+
* 1 [[CPD-458]][c] '''+''' 1 [[SUCROSE]][c] '''=>''' 1 [[CPD-1099]][c] '''+''' 1 [[MYO-INOSITOL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ02145]]
−
* Gene: [[SJ03223]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13485]]
+
* Gene: [[SJ05258]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ17324]]
+
* Gene: [[SJ02144]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19133]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09474]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis:
+
* [[PWY-5337]], stachyose biosynthesis:
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6524]], lychnose and isolychnose biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6525]], stellariose and mediose biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR118655
+
* METANETX-RXN : MNXR95552
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20162 20162]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02411 R02411]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=[cysteine desulfurase]-s-sulfanylcysteine:[acceptor protein]-cysteine sulfurtransferase}}
+
{{#set: common-name=raffinose synthase}}
−
{{#set: ec-number=ec-2.8.1.7}}
+
{{#set: ec-number=ec-2.4.1.82}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 2.4.1.82-RXN

  • direction:
    • left-to-right
  • common-name:
    • raffinose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5337, stachyose biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524, lychnose and isolychnose biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525, stellariose and mediose biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95552
  • RHEA:
  • LIGAND-RXN:





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