Difference between revisions of "2.4.1.83-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * direction: ** left-to-right * common-na...")
(Created page with "Category:reaction == Reaction 2.4.1.83-RXN == * direction: ** left-to-right * common-name: ** dolichol phosphate mannose synthase ** dolichyl-phosphate beta-d-mannosyltran...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
+
== Reaction 2.4.1.83-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** threonine-trna ligase
+
** dolichol phosphate mannose synthase
 +
** dolichyl-phosphate beta-d-mannosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3]
+
** [http://enzyme.expasy.org/EC/2.4.1.83 ec-2.4.1.83]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[DOLICHOLP]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-171]][c] '''+''' 1 [[GDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03199]]
+
* Gene: [[SJ09824]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20100]]
+
* Gene: [[SJ17231]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ17482]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7921]], protein O-mannosylation I (yeast):
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7922]], protein O-mannosylation II (mammals, core M1 and core M2):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115158
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24625 24625]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21185 21185]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01009 R01009]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O83809 O83809]
+
** [http://www.uniprot.org/uniprot/P14020 P14020]
−
** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
+
** [http://www.uniprot.org/uniprot/Q26732 Q26732]
−
** [http://www.uniprot.org/uniprot/P56071 P56071]
+
** [http://www.uniprot.org/uniprot/P54856 P54856]
−
** [http://www.uniprot.org/uniprot/O58430 O58430]
+
** [http://www.uniprot.org/uniprot/Q9TYJ7 Q9TYJ7]
−
** [http://www.uniprot.org/uniprot/P47615 P47615]
+
** [http://www.uniprot.org/uniprot/O14466 O14466]
−
** [http://www.uniprot.org/uniprot/O05947 O05947]
 
−
** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
 
−
** [http://www.uniprot.org/uniprot/O67583 O67583]
 
−
** [http://www.uniprot.org/uniprot/O27504 O27504]
 
−
** [http://www.uniprot.org/uniprot/O51662 O51662]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
 
−
** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
 
−
** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
 
−
** [http://www.uniprot.org/uniprot/P43014 P43014]
 
−
** [http://www.uniprot.org/uniprot/P46244 P46244]
 
−
** [http://www.uniprot.org/uniprot/P75225 P75225]
 
−
** [http://www.uniprot.org/uniprot/Q48989 Q48989]
 
−
** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
 
−
** [http://www.uniprot.org/uniprot/O04630 O04630]
 
−
** [http://www.uniprot.org/uniprot/P18255 P18255]
 
−
** [http://www.uniprot.org/uniprot/P18256 P18256]
 
−
** [http://www.uniprot.org/uniprot/P04801 P04801]
 
−
** [http://www.uniprot.org/uniprot/P07236 P07236]
 
−
** [http://www.uniprot.org/uniprot/P26639 P26639]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=threonine-trna ligase}}
+
{{#set: common-name=dolichyl-phosphate beta-d-mannosyltransferase|dolichol phosphate mannose synthase}}
−
{{#set: ec-number=ec-6.1.1.3}}
+
{{#set: ec-number=ec-2.4.1.83}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction 2.4.1.83-RXN

  • direction:
    • left-to-right
  • common-name:
    • dolichol phosphate mannose synthase
    • dolichyl-phosphate beta-d-mannosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS, protein N-glycosylation initial phase (eukaryotic):
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-7921, protein O-mannosylation I (yeast):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7922, protein O-mannosylation II (mammals, core M1 and core M2):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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