Difference between revisions of "2.4.1.83-RXN"

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(Created page with "Category:reaction == Reaction URPHOS-RXN == * direction: ** reversible * common-name: ** uridine phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4....")
(Created page with "Category:reaction == Reaction ExchangeSeed-MG+2 == * direction: ** reversible == Reaction formula == * 1.0 MG+2[C-BOUNDARY] '''<=>''' 1.0 MG+2[e] == Gene(s) associ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction URPHOS-RXN ==
+
== Reaction ExchangeSeed-MG+2 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** uridine phosphorylase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
 
−
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c]
+
* 1.0 [[MG+2]][C-BOUNDARY] '''<=>''' 1.0 [[MG+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03195]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea):
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24391 24391]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P52624 P52624]
 
−
** [http://www.uniprot.org/uniprot/P43770 P43770]
 
−
** [http://www.uniprot.org/uniprot/Q16831 Q16831]
 
−
** [http://www.uniprot.org/uniprot/P12758 P12758]
 
−
** [http://www.uniprot.org/uniprot/P19662 P19662]
 
−
** [http://www.uniprot.org/uniprot/O08444 O08444]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
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{{#set: common-name=uridine phosphorylase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-2.4.2.2|ec-2.4.2.3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 13:16, 14 January 2021

Reaction ExchangeSeed-MG+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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