Difference between revisions of "2.4.2.26-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-33...")
(Created page with "Category:reaction == Reaction LUMAZINESYN-RXN == * direction: ** left-to-right * common-name: ** 6,7-dimethyl-8-ribityllumazine synthase * ec-number: ** [http://enzyme.exp...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] ==
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== Reaction LUMAZINESYN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-3398]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4479 tax-4479]
 
 
* common-name:
 
* common-name:
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** c4 photosynthetic carbon assimilation cycle, pepck type
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** 6,7-dimethyl-8-ribityllumazine synthase
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== Reaction(s) found ==
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* ec-number:
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* [[ALANINE-AMINOTRANSFERASE-RXN]]
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** [http://enzyme.expasy.org/EC/2.5.1.78 ec-2.5.1.78]
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* [[ASPAMINOTRANS-RXN]]
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== Reaction formula ==
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* [[MALATE-DEHYDROGENASE-NADP+-RXN]]
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* 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[WATER]][c]
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* [[MALIC-NADP-RXN]]
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== Gene(s) associated with this reaction  ==
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* [[PEPCARBOX-RXN]]
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* Gene: [[SJ04442]]
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* [[PEPCARBOXYKIN-RXN]]
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** Category: [[annotation]]
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* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-13697]]
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** Category: [[orthology]]
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* [[RXN-13698]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN0-5224]]
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== Pathway(s)  ==
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== Reaction(s) not found ==
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* [[PWY-6167]], flavin biosynthesis II (archaea):
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-374 TRANS-RXN-374]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-373 TRANS-RXN-373]
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* [[PWY-6168]], flavin biosynthesis III (fungi):
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{{#set: taxonomic-range=tax-3398|tax-4479}}
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: common-name=c4 photosynthetic carbon assimilation cycle, pepck type}}
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
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{{#set: nb reaction found=10}}
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: completion rate=0.83}}
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== Reconstruction information  ==
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{{#set: nb total reaction=12}}
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
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{{#set: direction=left-to-right}}
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{{#set: common-name=6,7-dimethyl-8-ribityllumazine synthase}}
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{{#set: ec-number=ec-2.5.1.78}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:46, 18 December 2020

Reaction LUMAZINESYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6,7-dimethyl-8-ribityllumazine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6167, flavin biosynthesis II (archaea):
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi):
    • 7 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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