Difference between revisions of "2.4.2.26-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction LUMAZINESYN-RXN == * direction: ** left-to-right * common-name: ** 6,7-dimethyl-8-ribityllumazine synthase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-14520 == * direction: ** left-to-right * common-name: ** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase * ec-number: ** [ht...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction LUMAZINESYN-RXN ==
+
== Reaction RXN-14520 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 6,7-dimethyl-8-ribityllumazine synthase
+
** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.78 ec-2.5.1.78]
+
** [http://enzyme.expasy.org/EC/2.3.1.231 ec-2.3.1.231]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[yW-58]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[tRNAPhe-wybutosine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04442]]
+
* Gene: [[SJ13616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea):
+
* [[PWY-7283]], wybutosine biosynthesis:
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37120 37120]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=6,7-dimethyl-8-ribityllumazine synthase}}
+
{{#set: common-name=7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase}}
−
{{#set: ec-number=ec-2.5.1.78}}
+
{{#set: ec-number=ec-2.3.1.231}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:07, 5 January 2021

Reaction RXN-14520

  • direction:
    • left-to-right
  • common-name:
    • 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7283, wybutosine biosynthesis:
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.4.2.26-RXN&oldid=64805"