Difference between revisions of "2.4.2.38-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] == * direction: ** reversible * common-name: ** polynucleotide phosphoryla...")
(Created page with "Category:reaction == Reaction 2.4.2.38-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38] == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] ==
+
== Reaction 2.4.2.38-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** polynucleotide phosphorylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.8 ec-2.7.7.8]
+
** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Pi]][c] '''+''' 1 [[ssRNAs]][c] '''<=>''' 1 [[Nucleoside-Diphosphates]][c] '''+''' 1 [[ssRNAs]][c]
+
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-X]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10890]]
+
* Gene: [[SJ17017]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07492]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14408]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7920]], complex N-linked glycan biosynthesis (plants):
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR143751
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06016 R06016]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22099 22099]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10612 10612]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07282 R07282]
+
{{#set: ec-number=ec-2.4.2.38}}
−
* UNIPROT:
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P44584 P44584]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9PN44 Q9PN44]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P05055 P05055]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q9JV72 Q9JV72]
 
−
** [http://www.uniprot.org/uniprot/P41121 P41121]
 
−
** [http://www.uniprot.org/uniprot/P50849 P50849]
 
−
** [http://www.uniprot.org/uniprot/P72659 P72659]
 
−
** [http://www.uniprot.org/uniprot/O24288 O24288]
 
−
** [http://www.uniprot.org/uniprot/Q8CJQ6 Q8CJQ6]
 
−
** [http://www.uniprot.org/uniprot/O32966 O32966]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=polynucleotide phosphorylase}}
 
−
{{#set: ec-number=ec-2.7.7.8}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:21, 18 March 2021

Reaction 2.4.2.38-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7920, complex N-linked glycan biosynthesis (plants):
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR143751
  • LIGAND-RXN:
  • RHEA:





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