Difference between revisions of "2.4.2.38-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] == * direction: ** left-to-right * common-name: ** 3-ethylmalate dehydrogenase...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] == * direction: ** reversible * common-name: ** polynucleotide phosphoryla...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 3-ethylmalate dehydrogenase
+
** polynucleotide phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85]
+
** [http://enzyme.expasy.org/EC/2.7.7.8 ec-2.7.7.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-3618]][c] '''+''' 1 [[NADH]][c]
+
* 1 [[Pi]][c] '''+''' 1 [[ssRNAs]][c] '''<=>''' 1 [[Nucleoside-Diphosphates]][c] '''+''' 1 [[ssRNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21291]]
+
* Gene: [[SJ10890]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07492]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14408]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 22:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=3-ethylmalate dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22099 22099]
−
{{#set: ec-number=ec-1.1.1.85}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07282 R07282]
−
{{#set: nb pathway associated=1}}
+
* UNIPROT:
−
{{#set: reconstruction category=orthology|annotation}}
+
** [http://www.uniprot.org/uniprot/P44584 P44584]
 +
** [http://www.uniprot.org/uniprot/Q9PN44 Q9PN44]
 +
** [http://www.uniprot.org/uniprot/P05055 P05055]
 +
** [http://www.uniprot.org/uniprot/Q9JV72 Q9JV72]
 +
** [http://www.uniprot.org/uniprot/P41121 P41121]
 +
** [http://www.uniprot.org/uniprot/P50849 P50849]
 +
** [http://www.uniprot.org/uniprot/P72659 P72659]
 +
** [http://www.uniprot.org/uniprot/O24288 O24288]
 +
** [http://www.uniprot.org/uniprot/Q8CJQ6 Q8CJQ6]
 +
** [http://www.uniprot.org/uniprot/O32966 O32966]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=polynucleotide phosphorylase}}
 +
{{#set: ec-number=ec-2.7.7.8}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:32, 27 August 2019

Reaction 2.7.7.8-RXN

  • direction:
    • reversible
  • common-name:
    • polynucleotide phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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