Difference between revisions of "2.6.1.7-RXN"

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(Created page with "Category:reaction == Reaction GMP-SYN-NH3-RXN == * direction: ** left-to-right * common-name: ** xanthosine-5'-phosphate:ammonia ligase (amp-forming) == Reaction formula =...")
(Created page with "Category:reaction == Reaction 2.6.1.7-RXN == * direction: ** reversible * common-name: ** kynurenine-oxoglutarate transaminase * ec-number: ** [http://enzyme.expasy.org/EC...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GMP-SYN-NH3-RXN ==
+
== Reaction 2.6.1.7-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** xanthosine-5'-phosphate:ammonia ligase (amp-forming)
+
** kynurenine-oxoglutarate transaminase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.6.1.7 ec-2.6.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-14736]][c] '''<=>''' 1 [[CPD-476]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08788]]
+
* Gene: [[SJ07646]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ22386]]
+
* Gene: [[SJ03867]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine):
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107248
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18302 18302]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20964 20964]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01956 R01956]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=xanthosine-5'-phosphate:ammonia ligase (amp-forming)}}
+
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
 +
** [http://www.uniprot.org/uniprot/P47039 P47039]
 +
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
 +
** [http://www.uniprot.org/uniprot/Q9XX97 Q9XX97]
 +
** [http://www.uniprot.org/uniprot/Q8MP09 Q8MP09]
 +
** [http://www.uniprot.org/uniprot/O14209 O14209]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=kynurenine-oxoglutarate transaminase}}
 +
{{#set: ec-number=ec-2.6.1.7}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 2.6.1.7-RXN

  • direction:
    • reversible
  • common-name:
    • kynurenine-oxoglutarate transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6309, L-tryptophan degradation XI (mammalian, via kynurenine):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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