Difference between revisions of "2.7.1.152-RXN"

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(Created page with "Category:reaction == Reaction 3.5.1.98-RXN == * direction: ** left-to-right * common-name: ** histone deacetylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.98 ec-...")
(Created page with "Category:reaction == Reaction XANTHOSINEPHOSPHORY-RXN == * direction: ** left-to-right * common-name: ** xanthosine phosphorylase * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.5.1.98-RXN ==
+
== Reaction XANTHOSINEPHOSPHORY-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** histone deacetylase
+
** xanthosine phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.98 ec-3.5.1.98]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Histone-Acetyl-Lysine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[Histone-L-lysine]][c]
+
* 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c] '''=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[XANTHINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03195]]
−
* Gene: [[SJ20903]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18535]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05294]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ22263]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06568]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14812]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05293]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05295]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10893]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15906]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02774]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5695]], inosine 5'-phosphate degradation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[SALVPURINE2-PWY]], xanthine and xanthosine salvage:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27639 27639]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02297 R02297]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=histone deacetylase}}
+
{{#set: common-name=xanthosine phosphorylase}}
−
{{#set: ec-number=ec-3.5.1.98}}
+
{{#set: ec-number=ec-2.4.2.1}}
−
{{#set: nb gene associated=11}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:20, 14 January 2021

Reaction XANTHOSINEPHOSPHORY-RXN

  • direction:
    • left-to-right
  • common-name:
    • xanthosine phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5695, inosine 5'-phosphate degradation:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 6 reactions found over 6 reactions in the full pathway
  • SALVPURINE2-PWY, xanthine and xanthosine salvage:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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