Difference between revisions of "2.7.11.25-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12826 RXN-12826] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.6...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] == * direction: ** left-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12826 RXN-12826] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** dihydrosphingosine phosphate lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.59 ec-3.6.1.59]
+
** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[WATER]][c] '''+''' 1 [[m7G5-pppR-mRNAs]][c] '''<=>''' 1 [[7-METHYLGUANOSINE-5-PHOSPHATE]][c] '''+''' 1 [[CPD-8630]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-649]][c] '''=>''' 1 [[PALMITALDEHYDE]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07914]]
+
* Gene: [[SJ19063]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: ec-number=ec-3.6.1.59}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18594 18594]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02464 R02464]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=dihydrosphingosine phosphate lyase}}
 +
{{#set: ec-number=ec-4.1.2.27}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • dihydrosphingosine phosphate lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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