Difference between revisions of "2.7.13.3-RXN"

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(Created page with "Category:reaction == Reaction DIHYDROFOLATEREDUCT-RXN == * direction: ** left-to-right * common-name: ** dihydrofolate reductase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction RXN-14276 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIHYDROFOLATEREDUCT-RXN ==
+
== Reaction RXN-14276 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** dihydrofolate reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.3 ec-1.5.1.3]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROFOLATE-GLU-N]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[CPD0-2108]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14916]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02922]]
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* Gene: [[SJ03584]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ17385]]
+
* Gene: [[SJ04769]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19601]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11954]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[1CMET2-PWY]], folate transformations III (E. coli):
+
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered):
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-3841]], folate transformations II (plants):
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6614]], tetrahydrofolate biosynthesis:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15011 15011]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00939 R00939]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dihydrofolate reductase}}
+
{{#set: ec-number=ec-4.2.1.119}}
−
{{#set: ec-number=ec-1.5.1.3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:35, 5 January 2021

Reaction RXN-14276

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6920, 6-gingerol analog biosynthesis (engineered):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.7.13.3-RXN&oldid=76863"