Difference between revisions of "2.7.7.60-RXN"

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(Created page with "Category:reaction == Reaction ORNITHINE-GLU-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** ornithine--oxo-glutarate aminotransferase ** ornithine-&de...")
(Created page with "Category:reaction == Reaction 2.7.7.60-RXN == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase * ec-number: ** [http://en...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ORNITHINE-GLU-AMINOTRANSFERASE-RXN ==
+
== Reaction 2.7.7.60-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ornithine--oxo-glutarate aminotransferase
+
** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
−
** ornithine-δ-aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.13 ec-2.6.1.13]
+
** [http://enzyme.expasy.org/EC/2.7.7.60 ec-2.7.7.60]
 +
* synonymous:
 +
** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
* 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09475]]
+
* Gene: [[SJ10622]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 18: Line 19:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis:
+
* [[PWY-7560]], methylerythritol phosphate pathway II:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
+
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-3341]], L-proline biosynthesis III (from L-ornithine):
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine):
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96807
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25160 25160]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=ornithine--oxo-glutarate aminotransferase|ornithine-&delta;-aminotransferase}}
+
{{#set: common-name=4-diphosphocytidyl-2c-methyl-d-erythritol synthase}}
−
{{#set: ec-number=ec-2.6.1.13}}
+
{{#set: ec-number=ec-2.7.7.60}}
 +
{{#set: synonymous=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 2.7.7.60-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
  • ec-number:
  • synonymous:
    • 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7560, methylerythritol phosphate pathway II:
    • 9 reactions found over 9 reactions in the full pathway
  • NONMEVIPP-PWY, methylerythritol phosphate pathway I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96807
  • RHEA:
  • LIGAND-RXN:






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