Difference between revisions of "2.7.7.60-RXN"

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(Created page with "Category:reaction == Reaction RXN-14774 == * direction: ** left-to-right * common-name: ** 3-ketoacyl-coa thiolase ** acetyl-coa c-acyltransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction 2.7.7.60-RXN == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase * ec-number: ** [http://en...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14774 ==
+
== Reaction 2.7.7.60-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-ketoacyl-coa thiolase
+
** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
−
** acetyl-coa c-acyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/2.7.7.60 ec-2.7.7.60]
 +
* synonymous:
 +
** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[CPD-15667]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15668]][c]
+
* 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16470]]
+
* Gene: [[SJ10622]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09371]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21818]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14898]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21817]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast):
+
* [[PWY-7560]], methylerythritol phosphate pathway II:
−
** '''6''' reactions found over '''12''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96807
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
+
{{#set: common-name=4-diphosphocytidyl-2c-methyl-d-erythritol synthase}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: ec-number=ec-2.7.7.60}}
−
{{#set: nb gene associated=5}}
+
{{#set: synonymous=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 2.7.7.60-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
  • ec-number:
  • synonymous:
    • 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7560, methylerythritol phosphate pathway II:
    • 9 reactions found over 9 reactions in the full pathway
  • NONMEVIPP-PWY, methylerythritol phosphate pathway I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96807
  • RHEA:
  • LIGAND-RXN:






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