Difference between revisions of "2.7.7.60-RXN"

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(Created page with "Category:reaction == Reaction ALANINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** glutamate-pyruvate aminotransferase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction 2.7.7.60-RXN == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase * ec-number: ** [http://en...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALANINE-AMINOTRANSFERASE-RXN ==
+
== Reaction 2.7.7.60-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate-pyruvate aminotransferase
+
** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2]
+
** [http://enzyme.expasy.org/EC/2.7.7.60 ec-2.7.7.60]
 +
* synonymous:
 +
** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06815]]
+
* Gene: [[SJ10622]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19809]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II:
+
* [[PWY-7560]], methylerythritol phosphate pathway II:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[ALANINE-DEG3-PWY]], L-alanine degradation III:
+
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96807
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19456 19456]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P13191 P13191]
+
{{#set: common-name=4-diphosphocytidyl-2c-methyl-d-erythritol synthase}}
−
** [http://www.uniprot.org/uniprot/P25409 P25409]
+
{{#set: ec-number=ec-2.7.7.60}}
−
** [http://www.uniprot.org/uniprot/P24298 P24298]
+
{{#set: synonymous=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
−
** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P34106 P34106]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P52894 P52894]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/Q42685 Q42685]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glutamate-pyruvate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.2}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 2.7.7.60-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
  • ec-number:
  • synonymous:
    • 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7560, methylerythritol phosphate pathway II:
    • 9 reactions found over 9 reactions in the full pathway
  • NONMEVIPP-PWY, methylerythritol phosphate pathway I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96807
  • RHEA:
  • LIGAND-RXN:






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