Difference between revisions of "2.7.7.64-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.72-RXN 2.1.1.72-RXN] == * direction: ** left-to-right * common-name: ** site-specific dna-met...")
(Created page with "Category:reaction == Reaction ARGININE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** arginine-trna ligase * ec-number: ** [http://enzyme.expasy.org/E...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.72-RXN 2.1.1.72-RXN] ==
+
== Reaction ARGININE--TRNA-LIGASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** site-specific dna-methyltransferase (adenine-specific)
+
** arginine-trna ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.72 ec-2.1.1.72]
+
** [http://enzyme.expasy.org/EC/6.1.1.19 ec-6.1.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-Adenines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-Containing-N6-Methyladenine]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ARG]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09110]]
+
* Gene: [[SJ11647]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05085]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13753]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging:
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15198 15198]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20302 20302]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02961 R02961]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7B7V5 Q7B7V5]
+
** [http://www.uniprot.org/uniprot/P40329 P40329]
−
** [http://www.uniprot.org/uniprot/P44414 P44414]
+
** [http://www.uniprot.org/uniprot/P35868 P35868]
−
** [http://www.uniprot.org/uniprot/Q57168 Q57168]
+
** [http://www.uniprot.org/uniprot/P43832 P43832]
−
** [http://www.uniprot.org/uniprot/Q9PIS1 Q9PIS1]
+
** [http://www.uniprot.org/uniprot/O51540 O51540]
−
** [http://www.uniprot.org/uniprot/P44431 P44431]
+
** [http://www.uniprot.org/uniprot/O67068 O67068]
−
** [http://www.uniprot.org/uniprot/P95510 P95510]
+
** [http://www.uniprot.org/uniprot/O59147 O59147]
−
** [http://www.uniprot.org/uniprot/P29749 P29749]
+
** [http://www.uniprot.org/uniprot/O83803 O83803]
−
** [http://www.uniprot.org/uniprot/P14385 P14385]
+
** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
−
** [http://www.uniprot.org/uniprot/P43422 P43422]
+
** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
−
** [http://www.uniprot.org/uniprot/Q47911 Q47911]
+
** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
−
** [http://www.uniprot.org/uniprot/P21311 P21311]
+
** [http://www.uniprot.org/uniprot/P46906 P46906]
−
** [http://www.uniprot.org/uniprot/P14751 P14751]
+
** [http://www.uniprot.org/uniprot/Q57689 Q57689]
−
** [http://www.uniprot.org/uniprot/P14827 P14827]
+
** [http://www.uniprot.org/uniprot/O27496 O27496]
−
** [http://www.uniprot.org/uniprot/P25240 P25240]
+
** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
−
** [http://www.uniprot.org/uniprot/P25239 P25239]
+
** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
−
** [http://www.uniprot.org/uniprot/P29538 P29538]
+
** [http://www.uniprot.org/uniprot/P56128 P56128]
−
** [http://www.uniprot.org/uniprot/Q03055 Q03055]
+
** [http://www.uniprot.org/uniprot/P47618 P47618]
−
** [http://www.uniprot.org/uniprot/Q51829 Q51829]
+
** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
−
** [http://www.uniprot.org/uniprot/P25238 P25238]
+
** [http://www.uniprot.org/uniprot/Q08888 Q08888]
−
** [http://www.uniprot.org/uniprot/P35516 P35516]
+
** [http://www.uniprot.org/uniprot/P54136 P54136]
−
** [http://www.uniprot.org/uniprot/P33563 P33563]
+
** [http://www.uniprot.org/uniprot/P38714 P38714]
−
** [http://www.uniprot.org/uniprot/P43641 P43641]
+
** [http://www.uniprot.org/uniprot/Q05506 Q05506]
−
** [http://www.uniprot.org/uniprot/P45454 P45454]
+
** [http://www.uniprot.org/uniprot/P75222 P75222]
−
** [http://www.uniprot.org/uniprot/P50193 P50193]
+
** [http://www.uniprot.org/uniprot/P11875 P11875]
−
** [http://www.uniprot.org/uniprot/Q56004 Q56004]
+
** [http://www.uniprot.org/uniprot/O23247 O23247]
−
** [http://www.uniprot.org/uniprot/P73682 P73682]
+
** [http://www.uniprot.org/uniprot/O74781 O74781]
−
** [http://www.uniprot.org/uniprot/P31118 P31118]
 
−
** [http://www.uniprot.org/uniprot/O41063 O41063]
 
−
** [http://www.uniprot.org/uniprot/P12427 P12427]
 
−
** [http://www.uniprot.org/uniprot/P04392 P04392]
 
−
** [http://www.uniprot.org/uniprot/P0AEE8 P0AEE8]
 
−
** [http://www.uniprot.org/uniprot/P08957 P08957]
 
−
** [http://www.uniprot.org/uniprot/P00472 P00472]
 
−
** [http://www.uniprot.org/uniprot/P04393 P04393]
 
−
** [http://www.uniprot.org/uniprot/P00473 P00473]
 
−
** [http://www.uniprot.org/uniprot/P24582 P24582]
 
−
** [http://www.uniprot.org/uniprot/P00474 P00474]
 
−
** [http://www.uniprot.org/uniprot/P04043 P04043]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=site-specific dna-methyltransferase (adenine-specific)}}
+
{{#set: common-name=arginine-trna ligase}}
−
{{#set: ec-number=ec-2.1.1.72}}
+
{{#set: ec-number=ec-6.1.1.19}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction ARGININE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • arginine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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