Difference between revisions of "2.7.8.11-RXN"

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(Created page with "Category:reaction == Reaction ENOYL-ACP-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated fatty acyl-[acp] dehydrogenase ** fatty acid sy...")
(Created page with "Category:reaction == Reaction 2.7.8.11-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol synthase * ec-number: ** [http://enzyme.expasy.org/EC/2....")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ENOYL-ACP-REDUCT-NADPH-RXN ==
+
== Reaction 2.7.8.11-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2,3,4-saturated fatty acyl-[acp] dehydrogenase
+
** phosphatidylinositol synthase
−
** fatty acid synthase
 
−
** 2,3,4-saturated-fatty-acid-[acp] reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.39 ec-1.3.1.39]
+
** [http://enzyme.expasy.org/EC/2.7.8.11 ec-2.7.8.11]
−
** [http://enzyme.expasy.org/EC/1.3.1.104 ec-1.3.1.104]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/1.3.1.10 ec-1.3.1.10]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
+
* 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ06043]]
−
* Gene: [[SJ11672]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04769]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06616]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10624]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04443]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06944]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15983]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00320]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13014]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[SJ06760]]
−
* Gene: [[SJ19629]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03883]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00613]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18059]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06617]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
+
* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''13''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7625]], phosphatidylinositol biosynthesis II (eukaryotes):
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6352]], 3-phosphoinositide biosynthesis:
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115218
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22566 22566]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11581 11581]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01404 R01404]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01802 R01802]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
+
** [http://www.uniprot.org/uniprot/P06197 P06197]
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
+
** [http://www.uniprot.org/uniprot/P70500 P70500]
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
+
** [http://www.uniprot.org/uniprot/Q8LBA6 Q8LBA6]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=fatty acid synthase|2,3,4-saturated-fatty-acid-[acp] reductase|2,3,4-saturated fatty acyl-[acp] dehydrogenase}}
+
{{#set: common-name=phosphatidylinositol synthase}}
−
{{#set: ec-number=ec-1.3.1.104|ec-2.3.1.85|ec-1.3.1.39|ec-2.3.1.86|ec-1.3.1.10}}
+
{{#set: ec-number=ec-2.7.8.11}}
−
{{#set: nb gene associated=15}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction 2.7.8.11-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylinositol synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PHOSLIPSYN2-PWY, superpathway of phospholipid biosynthesis II (plants):
    • 13 reactions found over 3 reactions in the full pathway
  • PWY-7625, phosphatidylinositol biosynthesis II (eukaryotes):
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6352, 3-phosphoinositide biosynthesis:
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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