Difference between revisions of "2.7.8.11-RXN"
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(Created page with "Category:reaction == Reaction RXN-9384 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] == Reaction formula == * 1 HS[c...") |
(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-NADH-RXN == * direction: ** left-to-right * common-name: ** glutamate synthase * ec-number: ** [http://enzyme.expasy.org/E...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GLUTAMATE-SYNTHASE-NADH-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** glutamate synthase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NAD]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ10812]] | |
− | * | + | ** Category: [[annotation]] |
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ10813]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ20190]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ04922]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6963]], ammonia assimilation cycle I: | ||
+ | ** '''4''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13755 13755] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093] |
− | {{#set: direction= | + | * UNIPROT: |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/Q03460 Q03460] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/Q22275 Q22275] |
− | {{#set: reconstruction category=orthology}} | + | ** [http://www.uniprot.org/uniprot/O61143 O61143] |
− | {{#set: reconstruction tool=pantograph}} | + | ** [http://www.uniprot.org/uniprot/Q9C102 Q9C102] |
+ | ** [http://www.uniprot.org/uniprot/Q9P540 Q9P540] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=glutamate synthase}} | ||
+ | {{#set: ec-number=ec-1.4.1.14}} | ||
+ | {{#set: nb gene associated=4}} | ||
+ | {{#set: nb pathway associated=2}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:04, 5 January 2021
Contents
Reaction GLUTAMATE-SYNTHASE-NADH-RXN
- direction:
- left-to-right
- common-name:
- glutamate synthase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ10812
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ10813
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ20190
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ04922
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6963, ammonia assimilation cycle I:
- 4 reactions found over 2 reactions in the full pathway
- GLUGLNSYN-PWY, L-glutamate biosynthesis IV:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links