Difference between revisions of "2.7.9.3-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYLBENZOATE-COA-LIG-RXN O-SUCCINYLBENZOATE-COA-LIG-RXN] == * direction: ** left-to-right * c...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13689 RXN-13689] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYLBENZOATE-COA-LIG-RXN O-SUCCINYLBENZOATE-COA-LIG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13689 RXN-13689] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** o-succinylbenzoate-coa ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.26 ec-6.2.1.26]
+
** [http://enzyme.expasy.org/EC/1.1.3.8 ec-1.1.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYLBENZOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-6972]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[L-GULONO-1-4-LACTONE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03066]]
+
* Gene: [[SJ03315]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03311]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10053 R10053]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17010 17010]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32366 32366]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04030 R04030]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P37353 P37353]
 
−
** [http://www.uniprot.org/uniprot/P23971 P23971]
 
−
** [http://www.uniprot.org/uniprot/Q9CHK3 Q9CHK3]
 
−
** [http://www.uniprot.org/uniprot/Q55182 Q55182]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=o-succinylbenzoate-coa ligase}}
+
{{#set: ec-number=ec-1.1.3.8}}
−
{{#set: ec-number=ec-6.2.1.26}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction RXN-13689

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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