Difference between revisions of "2.8.2.23-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7745 RXN-7745] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:reaction == Reaction 2.8.2.23-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine 3-sulfotransferase 1 ** [heparan sulfate]-&alph...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7745 RXN-7745] ==
+
== Reaction 2.8.2.23-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** [heparan sulfate]-glucosamine 3-sulfotransferase 1
 +
** [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
+
** [http://enzyme.expasy.org/EC/2.8.2.23 ec-2.8.2.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7066]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
+
* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21291]]
+
* Gene: [[SJ00944]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ17721]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21424]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08012]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20108]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07694]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
+
* [[PWY-6558]], heparan sulfate biosynthesis (late stages):
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00994 R00994]
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32718 32718]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.1.1}}
+
{{#set: common-name=[heparan sulfate]-glucosamine 3-sulfotransferase 1|[heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.8.2.23}}
 +
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction 2.8.2.23-RXN

  • direction:
    • left-to-right
  • common-name:
    • [heparan sulfate]-glucosamine 3-sulfotransferase 1
    • [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6558, heparan sulfate biosynthesis (late stages):
    • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "heparan sulfate]-glucosamine 3-sulfotransferase 1" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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