Difference between revisions of "2.8.2.30-RXN"

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(Created page with "Category:reaction == Reaction RXN-11355 == * direction: ** left-to-right * common-name: ** 15-cis phytoene desaturase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5.5...")
(Created page with "Category:reaction == Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** glutaconyl-coa decarboxylase * ec-number: ** [http://enzyme....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11355 ==
+
== Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 15-cis phytoene desaturase
+
** glutaconyl-coa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.5.5 ec-1.3.5.5]
+
** [http://enzyme.expasy.org/EC/4.1.1.70 ec-4.1.1.70]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12321]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 2 [[Plastoquinols]][c]
+
* 1 [[GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08891]]
+
* Gene: [[SJ07909]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5177]], glutaryl-CoA degradation:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107899
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23972 23972]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09652 R09652]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03028 R03028]
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30290 30290]
+
{{#set: common-name=glutaconyl-coa decarboxylase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-4.1.1.70}}
−
{{#set: common-name=15-cis phytoene desaturase}}
 
−
{{#set: ec-number=ec-1.3.5.5}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:33, 15 March 2021

Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN

  • direction:
    • reversible
  • common-name:
    • glutaconyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5177, glutaryl-CoA degradation:
    • 5 reactions found over 5 reactions in the full pathway
  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107899
  • RHEA:
  • LIGAND-RXN:





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