Difference between revisions of "23S-rRNA-5-methylcytosine1962"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] == * direction: ** left-to-right * common-...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NUCLEOTIDASE-RXN NUCLEOTIDASE-RXN] == * direction: ** left-to-right * common-name: ** nucleotidase...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NUCLEOTIDASE-RXN NUCLEOTIDASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrate reductase
+
** nucleotidase
−
** nitrate reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.1.3 ec-1.7.1.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.31 ec-3.1.3.31]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[Nucleotides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleosides]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00644]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ09030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ15446]]
+
* Gene: [[SJ01133]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ05836]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18402]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11258]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18895]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04753]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15366]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04752]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19063 19063]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22141 22141]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00796 R00796]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01572 R01572]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q12561 Q12561]
 
−
** [http://www.uniprot.org/uniprot/P22945 P22945]
 
−
** [http://www.uniprot.org/uniprot/P39863 P39863]
 
−
** [http://www.uniprot.org/uniprot/Q05531 Q05531]
 
−
** [http://www.uniprot.org/uniprot/P36858 P36858]
 
−
** [http://www.uniprot.org/uniprot/P36842 P36842]
 
−
** [http://www.uniprot.org/uniprot/P39864 P39864]
 
−
** [http://www.uniprot.org/uniprot/Q01696 Q01696]
 
−
** [http://www.uniprot.org/uniprot/Q00284 Q00284]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrate reductase|nitrate reductase (nadph)}}
+
{{#set: common-name=nucleotidase}}
−
{{#set: ec-number=ec-1.7.1.3}}
+
{{#set: ec-number=ec-3.1.3.31}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=10}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction NUCLEOTIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • nucleotidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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