Difference between revisions of "23S-rRNA-pseudouridine2605"

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(Created page with "Category:gene == Gene SJ18863 == * transcription-direction: ** negative * right-end-position: ** 98043 * left-end-position: ** 74801 * centisome-position: ** 31.829807...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] == * direction: ** left-to-right * common-name: ** d-arabinono-1,4-lacto...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ18863 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] ==
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* transcription-direction:
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* direction:
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** negative
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** left-to-right
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* right-end-position:
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* common-name:
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** 98043
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** d-arabinono-1,4-lactone oxidase
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* left-end-position:
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* ec-number:
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** 74801
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** [http://enzyme.expasy.org/EC/1.1.3.37 ec-1.1.3.37]
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* centisome-position:
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== Reaction formula ==
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** 31.829807   
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* 1 [[CPD-356]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ14473]]
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== Reaction(s) associated ==
 
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* [[DIHYDRODIPICSYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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* Gene: [[SJ03315]]
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* [[PWY-5097]]
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** Category: [[annotation]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[DAPLYSINESYN-PWY]]
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* Gene: [[SJ03311]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-2941]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* Gene: [[SJ14480]]
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* [[PWY-2942]]
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** Category: [[annotation]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: transcription-direction=negative}}
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* Gene: [[SJ14476]]
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{{#set: right-end-position=98043}}
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** Category: [[annotation]]
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{{#set: left-end-position=74801}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: centisome-position=31.829807    }}
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== Pathway(s)  ==
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6]
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{{#set: nb reaction associated=1}}
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** '''1''' reactions found over '''3''' reactions in the full pathway
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{{#set: nb pathway associated=4}}
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== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
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{{#set: direction=left-to-right}}
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{{#set: common-name=d-arabinono-1,4-lactone oxidase}}
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{{#set: ec-number=ec-1.1.3.37}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:28, 27 August 2019

Reaction 1.1.3.37-RXN

  • direction:
    • left-to-right
  • common-name:
    • d-arabinono-1,4-lactone oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3O-6, dehydro-D-arabinono-1,4-lactone biosynthesis: PWY3O-6
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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