Difference between revisions of "23S-rRNA-pseudouridine955-2504-2580"

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(Created page with "Category:gene == Gene SJ13300 == * transcription-direction: ** negative * right-end-position: ** 180413 * left-end-position: ** 155939 * centisome-position: ** 45.459686...")
(Created page with "Category:metabolite == Metabolite 23S-rRNA-pseudouridine955-2504-2580 == * common-name: ** a pseudouridine955/2504/2580 in 23s rrna == Reaction(s) known to consume the com...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ13300 ==
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== Metabolite 23S-rRNA-pseudouridine955-2504-2580 ==
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* transcription-direction:
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* common-name:
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** negative
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** a pseudouridine955/2504/2580 in 23s rrna
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* right-end-position:
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== Reaction(s) known to consume the compound ==
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** 180413
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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* [[RXN-11838]]
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** 155939
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== Reaction(s) of unknown directionality ==
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* centisome-position:
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{{#set: common-name=a pseudouridine955/2504/2580 in 23s rrna}}
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** 45.459686   
 
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== Organism(s) associated with this gene  ==
 
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* [[S.japonica_carotenoid_curated]]
 
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== Reaction(s) associated ==
 
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY3DJ-12]]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[SPHINGOLIPID-SYN-PWY]]
 
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** '''4''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5129]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=180413}}
 
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{{#set: left-end-position=155939}}
 
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{{#set: centisome-position=45.459686    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=1}}
 
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{{#set: nb pathway associated=3}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite 23S-rRNA-pseudouridine955-2504-2580

  • common-name:
    • a pseudouridine955/2504/2580 in 23s rrna

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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