Difference between revisions of "23S-rRNA-uracil-1939"

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(Created page with "Category:gene == Gene SJ15655 == * transcription-direction: ** positive * right-end-position: ** 236557 * left-end-position: ** 220908 * centisome-position: ** 75.36693...")
 
(Created page with "Category:gene == Gene SJ05274 == * transcription-direction: ** negative * right-end-position: ** 51204 * left-end-position: ** 50296 * centisome-position: ** 53.19795...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15655 ==
+
== Gene SJ05274 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 236557
+
** 51204
 
* left-end-position:
 
* left-end-position:
−
** 220908
+
** 50296
 
* centisome-position:
 
* centisome-position:
−
** 75.36693    
+
** 53.19795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[HBNOm]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RETINOL-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[RXN-12581]]
−
{{#set: right-end-position=236557}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=220908}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=75.36693   }}
+
* [[RXN-17728]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY66-368]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-367]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6872]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7782]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=51204}}
 +
{{#set: left-end-position=50296}}
 +
{{#set: centisome-position=53.19795   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 14:23, 26 August 2019

Gene SJ05274

  • transcription-direction:
    • negative
  • right-end-position:
    • 51204
  • left-end-position:
    • 50296
  • centisome-position:
    • 53.19795

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-368
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=23S-rRNA-uracil-1939&oldid=19528"