Difference between revisions of "23S-rRNA-uridine1911-1915-1917"

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(Created page with "Category:gene == Gene SJ02164 == * transcription-direction: ** negative * right-end-position: ** 8141 * left-end-position: ** 3320 * centisome-position: ** 0.61085 ==...")
(Created page with "Category:metabolite == Metabolite CPD-14717 == * common-name: ** (r)-2-hydroxy-stearoyl-coa * smiles: ** ccccccccccccccccc(o)c(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02164 ==
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== Metabolite CPD-14717 ==
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* transcription-direction:
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* common-name:
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** negative
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** (r)-2-hydroxy-stearoyl-coa
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* right-end-position:
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* smiles:
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** 8141
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** ccccccccccccccccc(o)c(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 3320
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** ojqmixcijflult-mxqbtarfsa-j
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* centisome-position:
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* molecular-weight:
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** 0.61085   
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** 1045.968
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[ACECOATRANS-RXN-CPD-14717/ACET//R-2-HYDROXYSTEARATE/ACETYL-COA.47.]]
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== Reaction(s) associated ==
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* [[RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.]]
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* [[PEROXID-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN-14240]]
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{{#set: common-name=(r)-2-hydroxy-stearoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ojqmixcijflult-mxqbtarfsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1045.968}}
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* [[RXN-15288]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17352]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-8635]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7214]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7445]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5466]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-6824]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-5469]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5461]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=8141}}
 
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{{#set: left-end-position=3320}}
 
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{{#set: centisome-position=0.61085    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=6}}
 

Revision as of 20:31, 18 December 2020

Metabolite CPD-14717

  • common-name:
    • (r)-2-hydroxy-stearoyl-coa
  • smiles:
    • ccccccccccccccccc(o)c(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • ojqmixcijflult-mxqbtarfsa-j
  • molecular-weight:
    • 1045.968

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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