Difference between revisions of "23S-rRNA-uridine2605"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANPRIBOSYLTRAN-RXN GUANPRIBOSYLTRAN-RXN] == * direction: ** reversible * common-name: ** guanine...")
(Created page with "Category:metabolite == Metabolite CPD-564 == * common-name: ** s-ribosyl-l-homocysteine * smiles: ** c(cc([n+])c(=o)[o-])scc1(oc(o)c(o)c(o)1) * inchi-key: ** iqfwynfdwrysr...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANPRIBOSYLTRAN-RXN GUANPRIBOSYLTRAN-RXN] ==
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== Metabolite CPD-564 ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** guanine phosphoribosyltransferase
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** s-ribosyl-l-homocysteine
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.4.2.8 ec-2.4.2.8]
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** c(cc([n+])c(=o)[o-])scc1(oc(o)c(o)c(o)1)
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== Reaction formula ==
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* inchi-key:
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* 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[GUANINE]][c] '''+''' 1 [[PRPP]][c]
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** iqfwynfdwrysra-oeqwsmlssa-n
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ15126]]
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** 267.296
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ12523]]
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=s-ribosyl-l-homocysteine}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=iqfwynfdwrysra-oeqwsmlssa-n}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=267.296}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-6599]], guanine and guanosine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6599 PWY-6599]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6620]], guanine and guanosine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6620 PWY-6620]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25427 25427]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01229 R01229]
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=guanine phosphoribosyltransferase}}
 
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{{#set: ec-number=ec-2.4.2.8}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-564

  • common-name:
    • s-ribosyl-l-homocysteine
  • smiles:
    • c(cc([n+])c(=o)[o-])scc1(oc(o)c(o)c(o)1)
  • inchi-key:
    • iqfwynfdwrysra-oeqwsmlssa-n
  • molecular-weight:
    • 267.296

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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